HL_7A5I_028

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUACCCUAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_028 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1917

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7A5I|1|A3|G|2574
7A5I|1|A3|U|2575
7A5I|1|A3|A|2576
7A5I|1|A3|C|2577
7A5I|1|A3|C|2578
7A5I|1|A3|C|2579
7A5I|1|A3|U|2580
7A5I|1|A3|A|2581
7A5I|1|A3|A|2582
7A5I|1|A3|C|2583

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 94

Transfer RNA; tRNA

Chain A6

Small subunit ribosomal RNA; SSU rRNA

Chain X

Transfer RNA; tRNA