HL_7A5I_031

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAACAGUAACCU

Length

12 nucleotides

Bulged bases

7A5I|1|A3|A|2760

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_031 not in the Motif Atlas

Geometric match to HL_5E6M_002

Geometric discrepancy: 0.3421

The information below is about HL_5E6M_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37734.1

Basepair signature

cWW-cWW-F-F

Number of instances in this motif group

2

Unit IDs

7A5I|1|A3|A|2753
7A5I|1|A3|A|2754
7A5I|1|A3|A|2755
7A5I|1|A3|C|2756
7A5I|1|A3|A|2757
7A5I|1|A3|G|2758
7A5I|1|A3|U|2759
7A5I|1|A3|A|2760
7A5I|1|A3|A|2792
7A5I|1|A3|C|2793
7A5I|1|A3|C|2794
7A5I|1|A3|U|2795

Current chains

Chain A3

16S rRNA

Nearby chains

Chain H3

39S ribosomal protein L9, mitochondrial

Chain X3

39S ribosomal protein L28, mitochondrial