HL_7A5I_038

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUGUUCAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_038 not in the Motif Atlas

Geometric match to HL_5J7L_012

Geometric discrepancy: 0.3986

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7A5I|1|A3|U|3037
7A5I|1|A3|U|3038
7A5I|1|A3|U|3039
7A5I|1|A3|G|3040
7A5I|1|A3|U|3041
7A5I|1|A3|U|3042
7A5I|1|A3|C|3043
7A5I|1|A3|A|3044
7A5I|1|A3|A|3045

Current chains

Chain A3

16S rRNA

Nearby chains

Chain L3

39S ribosomal protein L14, mitochondrial

Chain X

Transfer RNA; tRNA