HL_7A5I_046

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGCAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_046 not in the Motif Atlas

Geometric match to HL_4QK9_001

Geometric discrepancy: 0.186

The information below is about HL_4QK9_001

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7A5I|1|A6|A|772
7A5I|1|A6|G|773
7A5I|1|A6|C|774
7A5I|1|A6|A|775
7A5I|1|A6|A|776
7A5I|1|A6|U|777

Current chains

Chain A6

12S rRNA

Nearby chains

Chain L6

28S ribosomal protein S15, mitochondrial

Chain N6

28S ribosomal protein S17, mitochondrial