HL_7A5I_048

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_048 not in the Motif Atlas

Geometric match to HL_5SWD_005

Geometric discrepancy: 0.3966

The information below is about HL_5SWD_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

7A5I|1|A6|C|808
7A5I|1|A6|C|809
7A5I|1|A6|C|810
7A5I|1|A6|A|811
7A5I|1|A6|C|812
7A5I|1|A6|G|813

Current chains

Chain A6

12S rRNA

Nearby chains

Chain a6

28S ribosomal protein S34, mitochondrial