3D structure

PDB id
7A5P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human C Complex Spliceosome - Medium-resolution PERIPHERY
Experimental method
ELECTRON MICROSCOPY
Resolution
5 Å

Loop

Sequence
GUAUUGCAGUACCUC
Length
15 nucleotides
Bulged bases
7A5P|1|2|C|164, 7A5P|1|2|U|167
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7A5P|1|2|G|158
7A5P|1|2|U|159
7A5P|1|2|A|160
7A5P|1|2|U|161
7A5P|1|2|U|162
7A5P|1|2|G|163
7A5P|1|2|C|164
7A5P|1|2|A|165
7A5P|1|2|G|166
7A5P|1|2|U|167
7A5P|1|2|A|168
7A5P|1|2|C|169
7A5P|1|2|C|170
7A5P|1|2|U|171
7A5P|1|2|C|172

Current chains

Chain 2
U2 snRNA

Nearby chains

Chain W
U2 small nuclear ribonucleoprotein A'
Chain X
U2 small nuclear ribonucleoprotein B''
Chain l
Small nuclear ribonucleoprotein Sm D3
Chain m
Small nuclear ribonucleoprotein-associated proteins B and B'

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.0435 s