HL_7ABG_003

3D structure

PDB id

7ABG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-Bact-1 spliceosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.8 Å

Loop

Sequence

GUAUUGCAGUACCUC

Length

15 nucleotides

Bulged bases

7ABG|1|2|U|167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABG|1|2|G|158
7ABG|1|2|U|159
7ABG|1|2|A|160
7ABG|1|2|U|161
7ABG|1|2|U|162
7ABG|1|2|G|163
7ABG|1|2|C|164
7ABG|1|2|A|165
7ABG|1|2|G|166
7ABG|1|2|U|167
7ABG|1|2|A|168
7ABG|1|2|C|169
7ABG|1|2|C|170
7ABG|1|2|U|171
7ABG|1|2|C|172

Current chains

Chain 2

U2 snRNA

Nearby chains

Chain B

U2 small nuclear ribonucleoprotein B''

Chain l

Small nuclear ribonucleoprotein Sm D3