HL_7AC7_080

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7AC7|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AC7_080 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1916

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7AC7|1|2|G|462
7AC7|1|2|U|463
7AC7|1|2|U|464
7AC7|1|2|A|465
7AC7|1|2|A|466
7AC7|1|2|U|467
7AC7|1|2|A|468
7AC7|1|2|C|469
7AC7|1|2|C|470

Current chains

Chain 2

16S ribosomal RNA

Nearby chains