3D structure

PDB id
7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
UUUAGCAGCUUAAUAACCUGCUUA
Length
24 nucleotides
Bulged bases
7AC7|1|4|U|131
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AC7|1|4|U|110
7AC7|1|4|U|111
7AC7|1|4|U|112
7AC7|1|4|A|113
7AC7|1|4|G|114
7AC7|1|4|C|115
7AC7|1|4|A|116
7AC7|1|4|G|117
7AC7|1|4|C|118
7AC7|1|4|U|119
7AC7|1|4|U|120
7AC7|1|4|A|121
7AC7|1|4|A|122
7AC7|1|4|U|123
7AC7|1|4|A|124
7AC7|1|4|A|125
7AC7|1|4|C|126
7AC7|1|4|C|127
7AC7|1|4|U|128
7AC7|1|4|G|129
7AC7|1|4|C|130
7AC7|1|4|U|131
7AC7|1|4|U|132
7AC7|1|4|A|133

Current chains

Chain 4
transfer-messenger RNA (tmRNA)

Nearby chains

Chain 5
SsrA-binding protein
Chain h
30S ribosomal protein S3
Chain i
30S ribosomal protein S4
Chain j
30S ribosomal protein S5

Coloring options:

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