HL_7AC7_112
3D structure
- PDB id
- 7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- G(5MU)(PSU)CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AC7_112 not in the Motif Atlas
- Homologous match to HL_1SER_002
- Geometric discrepancy: 0.1401
- The information below is about HL_1SER_002
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.6
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
7AC7|1|7|G|53
7AC7|1|7|5MU|54
7AC7|1|7|PSU|55
7AC7|1|7|C|56
7AC7|1|7|G|57
7AC7|1|7|A|58
7AC7|1|7|U|59
7AC7|1|7|U|60
7AC7|1|7|C|61
Current chains
- Chain 7
- tRNA-Phe
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L16
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