HL_7ACR_009

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACR_009 not in the Motif Atlas

Homologous match to HL_5J7L_142

Geometric discrepancy: 0.1356

The information below is about HL_5J7L_142

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_01609.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

18

Unit IDs

7ACR|1|1|C|305
7ACR|1|1|U|306
7ACR|1|1|G|307
7ACR|1|1|G|308
7ACR|1|1|A|309
7ACR|1|1|A|310
7ACR|1|1|A|311
7ACR|1|1|G|312

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain U

50S ribosomal protein L24