3D structure

PDB id
7ACR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
GGGGUCAACCCGACUUAC
Length
18 nucleotides
Bulged bases
7ACR|1|1|G|882, 7ACR|1|1|G|883, 7ACR|1|1|U|884, 7ACR|1|1|A|887, 7ACR|1|1|C|888, 7ACR|1|1|C|890, 7ACR|1|1|C|893, 7ACR|1|1|U|894, 7ACR|1|1|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ACR|1|1|G|880
7ACR|1|1|G|881
7ACR|1|1|G|882
7ACR|1|1|G|883
7ACR|1|1|U|884
7ACR|1|1|C|885
7ACR|1|1|A|886
7ACR|1|1|A|887
7ACR|1|1|C|888
7ACR|1|1|C|889
7ACR|1|1|C|890
7ACR|1|1|G|891
7ACR|1|1|A|892
7ACR|1|1|C|893
7ACR|1|1|U|894
7ACR|1|1|U|895
7ACR|1|1|A|896
7ACR|1|1|C|897

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 4
Transfer-messenger RNA; tmRNA
Chain M
50S ribosomal protein L16

Coloring options:

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