3D structure

PDB id
7ACR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
GGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUAC
Length
51 nucleotides
Bulged bases
7ACR|1|1|G|2125, 7ACR|1|1|G|2128, 7ACR|1|1|U|2130, 7ACR|1|1|U|2131, 7ACR|1|1|U|2132, 7ACR|1|1|C|2145, 7ACR|1|1|A|2163, 7ACR|1|1|U|2167, 7ACR|1|1|U|2172
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ACR|1|1|G|2124
7ACR|1|1|G|2125
7ACR|1|1|A|2126
7ACR|1|1|G|2127
7ACR|1|1|G|2128
7ACR|1|1|C|2129
7ACR|1|1|U|2130
7ACR|1|1|U|2131
7ACR|1|1|U|2132
7ACR|1|1|G|2133
7ACR|1|1|A|2134
7ACR|1|1|A|2135
7ACR|1|1|G|2136
7ACR|1|1|U|2137
7ACR|1|1|G|2138
7ACR|1|1|U|2139
7ACR|1|1|G|2140
7ACR|1|1|G|2141
7ACR|1|1|A|2142
7ACR|1|1|C|2143
7ACR|1|1|G|2144
7ACR|1|1|C|2145
7ACR|1|1|C|2146
7ACR|1|1|A|2147
7ACR|1|1|G|2148
7ACR|1|1|U|2149
7ACR|1|1|C|2150
7ACR|1|1|U|2151
7ACR|1|1|G|2152
7ACR|1|1|C|2153
7ACR|1|1|A|2154
7ACR|1|1|U|2155
7ACR|1|1|G|2156
7ACR|1|1|G|2157
7ACR|1|1|A|2158
7ACR|1|1|G|2159
7ACR|1|1|C|2160
7ACR|1|1|C|2161
7ACR|1|1|G|2162
7ACR|1|1|A|2163
7ACR|1|1|C|2164
7ACR|1|1|C|2165
7ACR|1|1|U|2166
7ACR|1|1|U|2167
7ACR|1|1|G|2168
7ACR|1|1|A|2169
7ACR|1|1|A|2170
7ACR|1|1|A|2171
7ACR|1|1|U|2172
7ACR|1|1|A|2173
7ACR|1|1|C|2174

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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