HL_7AFI_024

3D structure

PDB id

7AFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state C (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

7AFI|1|A|U|84, 7AFI|1|A|U|85, 7AFI|1|A|G|86

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AFI_024 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.3533

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

7AFI|1|A|G|82
7AFI|1|A|C|83
7AFI|1|A|U|84
7AFI|1|A|U|85
7AFI|1|A|G|86
7AFI|1|A|C|87

Current chains

Chain A

16SrRNA

Nearby chains