HL_7AFL_009

3D structure

PDB id

7AFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7AFL|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AFL_009 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.2844

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

7AFL|1|A|C|342
7AFL|1|A|U|343
7AFL|1|A|A|344
7AFL|1|A|C|345
7AFL|1|A|G|346
7AFL|1|A|G|347

Current chains

Chain A

16SrRNA

Nearby chains