HL_7AFO_013

3D structure

PDB id

7AFO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AFO_013 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2899

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7AFO|1|A|C|522
7AFO|1|A|A|523
7AFO|1|A|G|524
7AFO|1|A|C|525
7AFO|1|A|C|526
7AFO|1|A|G|527

Current chains

Chain A

16SrRNA (body domain of the 30S ribosome)

Nearby chains

Chain L

30S ribosomal protein S12