3D structure

PDB id
7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGUUAACG
Length
8 nucleotides
Bulged bases
7AS8|1|A|U|591, 7AS8|1|A|C|594
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7AS8_020 not in the Motif Atlas
Homologous match to HL_4WF9_017
Geometric discrepancy: 0.1079
The information below is about HL_4WF9_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_50318.1
Basepair signature
cWW-cSH-F-F
Number of instances in this motif group
1

Unit IDs

7AS8|1|A|C|588
7AS8|1|A|G|589
7AS8|1|A|U|590
7AS8|1|A|U|591
7AS8|1|A|A|592
7AS8|1|A|A|593
7AS8|1|A|C|594
7AS8|1|A|G|595

Current chains

Chain A
23S rRNA

Nearby chains

Chain N
50S ribosomal protein L13
Chain V
50S ribosomal protein L21

Coloring options:


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