HL_7AS8_038
3D structure
- PDB id
- 7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAUUGGAUAUC
- Length
- 12 nucleotides
- Bulged bases
- 7AS8|1|A|U|1500, 7AS8|1|A|U|1501, 7AS8|1|A|A|1506, 7AS8|1|A|U|1507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AS8_038 not in the Motif Atlas
- Geometric match to HL_1WZ2_007
- Geometric discrepancy: 0.1315
- The information below is about HL_1WZ2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
7AS8|1|A|G|1497
7AS8|1|A|U|1498
7AS8|1|A|A|1499
7AS8|1|A|U|1500
7AS8|1|A|U|1501
7AS8|1|A|G|1502
7AS8|1|A|G|1503
7AS8|1|A|A|1504
7AS8|1|A|U|1505
7AS8|1|A|A|1506
7AS8|1|A|U|1507
7AS8|1|A|C|1508
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain R
- 50S ribosomal protein L17
Coloring options: