HL_7AS8_056

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AS8_056 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.245

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7AS8|1|A|G|2332
7AS8|1|A|G|2333
7AS8|1|A|U|2334
7AS8|1|A|U|2335
7AS8|1|A|G|2336
7AS8|1|A|G|2337
7AS8|1|A|A|2338
7AS8|1|A|A|2339
7AS8|1|A|A|2340
7AS8|1|A|U|2341
7AS8|1|A|C|2342

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L5