HL_7ASM_014

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7ASM|1|A|G|457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASM_014 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.1046

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

7ASM|1|A|G|456
7ASM|1|A|G|457
7ASM|1|A|A|458
7ASM|1|A|C|459
7ASM|1|A|C|460
7ASM|1|A|A|461
7ASM|1|A|U|462
7ASM|1|A|C|463

Current chains

Chain A

23S rRNA

Nearby chains