HL_7ASP_006

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUGAGACACGG

Length

11 nucleotides

Bulged bases

7ASP|1|X|U|331, 7ASP|1|X|G|332, 7ASP|1|X|A|333, 7ASP|1|X|G|334, 7ASP|1|X|C|336

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|X|C|330
7ASP|1|X|U|331
7ASP|1|X|G|332
7ASP|1|X|A|333
7ASP|1|X|G|334
7ASP|1|X|A|335
7ASP|1|X|C|336
7ASP|1|X|A|337
7ASP|1|X|C|338
7ASP|1|X|G|339
7ASP|1|X|G|340

Current chains

Chain X

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S16

Chain j

30S ribosomal protein S20