HL_7ASP_007

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

7ASP|1|X|A|389

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_007 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.297

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

7ASP|1|X|C|387
7ASP|1|X|G|388
7ASP|1|X|A|389
7ASP|1|X|A|390
7ASP|1|X|A|391
7ASP|1|X|G|392

Current chains

Chain X

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S16

Chain j

30S ribosomal protein S20