HL_7ASP_009

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GCAGCCGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_009 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.3715

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

7ASP|1|X|G|529
7ASP|1|X|C|530
7ASP|1|X|A|531
7ASP|1|X|G|532
7ASP|1|X|C|533
7ASP|1|X|C|534
7ASP|1|X|G|535
7ASP|1|X|C|536

Current chains

Chain X

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S12