HL_7ASP_011

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_011 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2984

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.3

Basepair signature

cWW-F

Number of instances in this motif group

5

Unit IDs

7ASP|1|X|C|697
7ASP|1|X|G|698
7ASP|1|X|G|699
7ASP|1|X|U|700
7ASP|1|X|G|701
7ASP|1|X|A|702
7ASP|1|X|A|703
7ASP|1|X|A|704
7ASP|1|X|U|705
7ASP|1|X|G|706

Current chains

Chain X

16S rRNA

Nearby chains