HL_7ASP_017

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAG

Length

38 nucleotides

Bulged bases

7ASP|1|X|G|1096, 7ASP|1|X|G|1101, 7ASP|1|X|A|1104

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|X|C|1081
7ASP|1|X|U|1082
7ASP|1|X|C|1083
7ASP|1|X|G|1084
7ASP|1|X|U|1085
7ASP|1|X|G|1086
7ASP|1|X|U|1087
7ASP|1|X|C|1088
7ASP|1|X|G|1089
7ASP|1|X|U|1090
7ASP|1|X|G|1091
7ASP|1|X|A|1092
7ASP|1|X|G|1093
7ASP|1|X|A|1094
7ASP|1|X|U|1095
7ASP|1|X|G|1096
7ASP|1|X|U|1097
7ASP|1|X|U|1098
7ASP|1|X|G|1099
7ASP|1|X|G|1100
7ASP|1|X|G|1101
7ASP|1|X|U|1102
7ASP|1|X|U|1103
7ASP|1|X|A|1104
7ASP|1|X|A|1105
7ASP|1|X|G|1106
7ASP|1|X|U|1107
7ASP|1|X|C|1108
7ASP|1|X|C|1109
7ASP|1|X|C|1110
7ASP|1|X|G|1111
7ASP|1|X|C|1112
7ASP|1|X|A|1113
7ASP|1|X|A|1114
7ASP|1|X|C|1115
7ASP|1|X|G|1116
7ASP|1|X|A|1117
7ASP|1|X|G|1118

Current chains

Chain X

16S rRNA

Nearby chains

Chain k

30S ribosomal protein S3

Chain m

30S ribosomal protein S5