HL_7ASP_018

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GUGACAAAC

Length

9 nucleotides

Bulged bases

7ASP|1|X|C|1179

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_018 not in the Motif Atlas

Geometric match to HL_2Y8Y_001

Geometric discrepancy: 0.2426

The information below is about HL_2Y8Y_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7ASP|1|X|G|1175
7ASP|1|X|U|1176
7ASP|1|X|G|1177
7ASP|1|X|A|1178
7ASP|1|X|C|1179
7ASP|1|X|A|1180
7ASP|1|X|A|1181
7ASP|1|X|A|1182
7ASP|1|X|C|1183

Current chains

Chain X

16S rRNA

Nearby chains