HL_7ASP_023

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UCGGAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_023 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2445

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7ASP|1|X|U|1526
7ASP|1|X|C|1527
7ASP|1|X|G|1528
7ASP|1|X|G|1529
7ASP|1|X|A|1530
7ASP|1|X|A|1531
7ASP|1|X|G|1532

Current chains

Chain X

16S rRNA

Nearby chains

Chain Y

Large subunit ribosomal RNA; LSU rRNA