HL_7ASP_027

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

AGCAUGAGUUAUGUCAUGU

Length

19 nucleotides

Bulged bases

7ASP|1|Y|A|136, 7ASP|1|Y|U|141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|Y|A|130
7ASP|1|Y|G|131
7ASP|1|Y|C|132
7ASP|1|Y|A|133
7ASP|1|Y|U|134
7ASP|1|Y|G|135
7ASP|1|Y|A|136
7ASP|1|Y|G|137
7ASP|1|Y|U|138
7ASP|1|Y|U|139
7ASP|1|Y|A|140
7ASP|1|Y|U|141
7ASP|1|Y|G|142
7ASP|1|Y|U|143
7ASP|1|Y|C|144
7ASP|1|Y|A|145
7ASP|1|Y|U|146
7ASP|1|Y|G|147
7ASP|1|Y|U|148

Current chains

Chain Y

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L23

Chain W

50S ribosomal protein L29