HL_7ASP_035

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7ASP|1|Y|G|457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_035 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.1638

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

7ASP|1|Y|G|456
7ASP|1|Y|G|457
7ASP|1|Y|A|458
7ASP|1|Y|C|459
7ASP|1|Y|C|460
7ASP|1|Y|A|461
7ASP|1|Y|U|462
7ASP|1|Y|C|463

Current chains

Chain Y

23S rRNA

Nearby chains