3D structure

PDB id
7ASP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 50 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
GCUUCUGC
Length
8 nucleotides
Bulged bases
7ASP|1|Y|C|1898
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ASP_066 not in the Motif Atlas
Homologous match to HL_4WF9_045
Geometric discrepancy: 0.4581
The information below is about HL_4WF9_045
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASP|1|Y|G|1894
7ASP|1|Y|C|1895
7ASP|1|Y|U|1896
7ASP|1|Y|U|1897
7ASP|1|Y|C|1898
7ASP|1|Y|U|1899
7ASP|1|Y|G|1900
7ASP|1|Y|C|1901

Current chains

Chain Y
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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