HL_7ASP_072
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 7ASP|1|Y|A|2295, 7ASP|1|Y|C|2302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASP_072 not in the Motif Atlas
- Homologous match to HL_4WF9_050
- Geometric discrepancy: 0.089
- The information below is about HL_4WF9_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
7ASP|1|Y|C|2291
7ASP|1|Y|U|2292
7ASP|1|Y|A|2293
7ASP|1|Y|A|2294
7ASP|1|Y|A|2295
7ASP|1|Y|A|2296
7ASP|1|Y|G|2297
7ASP|1|Y|G|2298
7ASP|1|Y|U|2299
7ASP|1|Y|A|2300
7ASP|1|Y|A|2301
7ASP|1|Y|C|2302
7ASP|1|Y|G|2303
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L27
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