HL_7ASP_078

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

AGUUCACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASP_078 not in the Motif Atlas

Homologous match to HL_5J7L_193

Geometric discrepancy: 0.3244

The information below is about HL_5J7L_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ASP|1|Y|A|2498
7ASP|1|Y|G|2499
7ASP|1|Y|U|2500
7ASP|1|Y|U|2501
7ASP|1|Y|C|2502
7ASP|1|Y|A|2503
7ASP|1|Y|C|2504
7ASP|1|Y|A|2505
7ASP|1|Y|U|2506

Current chains

Chain Y

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain K

50S ribosomal protein L16