HL_7ASP_094

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GUUAAGAGGAGUGGUUAGCUUCUGCGAAGCUACGAAUCGAAGC

Length

43 nucleotides

Bulged bases

7ASP|1|Y|C|1898

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|Y|G|1877
7ASP|1|Y|U|1878
7ASP|1|Y|U|1879
7ASP|1|Y|A|1880
7ASP|1|Y|A|1881
7ASP|1|Y|G|1882
7ASP|1|Y|A|1883
7ASP|1|Y|G|1884
7ASP|1|Y|G|1885
7ASP|1|Y|A|1886
7ASP|1|Y|G|1887
7ASP|1|Y|U|1888
7ASP|1|Y|G|1889
7ASP|1|Y|G|1890
7ASP|1|Y|U|1891
7ASP|1|Y|U|1892
7ASP|1|Y|A|1893
7ASP|1|Y|G|1894
7ASP|1|Y|C|1895
7ASP|1|Y|U|1896
7ASP|1|Y|U|1897
7ASP|1|Y|C|1898
7ASP|1|Y|U|1899
7ASP|1|Y|G|1900
7ASP|1|Y|C|1901
7ASP|1|Y|G|1902
7ASP|1|Y|A|1903
7ASP|1|Y|A|1904
7ASP|1|Y|G|1905
7ASP|1|Y|C|1906
7ASP|1|Y|U|1907
7ASP|1|Y|A|1908
7ASP|1|Y|C|1909
7ASP|1|Y|G|1910
7ASP|1|Y|A|1911
7ASP|1|Y|A|1912
7ASP|1|Y|U|1913
7ASP|1|Y|C|1914
7ASP|1|Y|G|1915
7ASP|1|Y|A|1916
7ASP|1|Y|A|1917
7ASP|1|Y|G|1918
7ASP|1|Y|C|1919

Current chains

Chain Y

23S rRNA

Nearby chains

Chain X

Small subunit ribosomal RNA; SSU rRNA