HL_7AZS_041

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7AZS|1|16SB|A|985

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_041 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.223

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

7AZS|1|16SB|C|983
7AZS|1|16SB|U|984
7AZS|1|16SB|A|985
7AZS|1|16SB|C|986
7AZS|1|16SB|G|987
7AZS|1|16SB|G|988

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain L14B

50S ribosomal protein L14

Chain L19B

50S ribosomal protein L19