HL_7AZS_043

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7AZS|1|16SB|U|1062

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_043 not in the Motif Atlas

Homologous match to HL_5J7L_011

Geometric discrepancy: 0.1395

The information below is about HL_5J7L_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7AZS|1|16SB|C|1060
7AZS|1|16SB|U|1061
7AZS|1|16SB|U|1062
7AZS|1|16SB|C|1063
7AZS|1|16SB|G|1064
7AZS|1|16SB|G|1065

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S3B

30S ribosomal protein S3

Chain S4B

30S ribosomal protein S4