HL_7AZS_045

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCAGCC(7MG)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 7MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_045 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.3178

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7AZS|1|16SB|G|1150
7AZS|1|16SB|C|1151
7AZS|1|16SB|A|1152
7AZS|1|16SB|G|1153
7AZS|1|16SB|C|1154
7AZS|1|16SB|C|1155
7AZS|1|16SB|7MG|1156
7AZS|1|16SB|C|1157

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain MRNB

mRNA

Chain S12B

30S ribosomal protein S12