HL_7AZS_061
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGCAACCCG
- Length
- 10 nucleotides
- Bulged bases
- 7AZS|1|16SB|C|1944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_061 not in the Motif Atlas
- Homologous match to HL_4LFB_029
- Geometric discrepancy: 0.2477
- The information below is about HL_4LFB_029
- Detailed Annotation
- T-loop with 3 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_93658.1
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7AZS|1|16SB|C|1941
7AZS|1|16SB|U|1942
7AZS|1|16SB|G|1943
7AZS|1|16SB|C|1944
7AZS|1|16SB|A|1945
7AZS|1|16SB|A|1946
7AZS|1|16SB|C|1947
7AZS|1|16SB|C|1948
7AZS|1|16SB|C|1949
7AZS|1|16SB|G|1950
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain L31B
- 50S ribosomal protein L31
- Chain S13B
- 30S ribosomal protein S13
- Chain S14B
- 30S ribosomal protein S14 type Z
- Chain S19B
- 30S ribosomal protein S19
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