HL_7AZS_070

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7AZS|1|23SA|A|186

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_070 not in the Motif Atlas

Geometric match to HL_7RQB_006

Geometric discrepancy: 0.0771

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

7AZS|1|23SA|G|184
7AZS|1|23SA|A|185
7AZS|1|23SA|A|186
7AZS|1|23SA|A|187
7AZS|1|23SA|C|188
7AZS|1|23SA|A|189
7AZS|1|23SA|U|190
7AZS|1|23SA|C|191

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L15A

50S ribosomal protein L15

Chain L28A

50S ribosomal protein L28