HL_7AZS_097

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_097 not in the Motif Atlas

Geometric match to HL_4V9F_015

Geometric discrepancy: 0.0831

The information below is about HL_4V9F_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7AZS|1|23SA|C|1271
7AZS|1|23SA|G|1272
7AZS|1|23SA|C|1273
7AZS|1|23SA|G|1274
7AZS|1|23SA|A|1275
7AZS|1|23SA|G|1276

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L20A

50S ribosomal protein L20

Chain L21A

50S ribosomal protein L21