HL_7AZS_101

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7AZS|1|23SA|U|1445, 7AZS|1|23SA|U|1446

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_101 not in the Motif Atlas

Geometric match to HL_7RQB_036

Geometric discrepancy: 0.0733

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7AZS|1|23SA|G|1438
7AZS|1|23SA|U|1439
7AZS|1|23SA|U|1440
7AZS|1|23SA|A|1441
7AZS|1|23SA|A|1442
7AZS|1|23SA|U|1443
7AZS|1|23SA|A|1444
7AZS|1|23SA|U|1445
7AZS|1|23SA|U|1446
7AZS|1|23SA|C|1447

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L23A

50S ribosomal protein L23