HL_7AZS_151

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_151 not in the Motif Atlas

Geometric match to HL_4WF9_016

Geometric discrepancy: 0.0798

The information below is about HL_4WF9_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7AZS|1|23SB|C|515
7AZS|1|23SB|G|516
7AZS|1|23SB|G|517
7AZS|1|23SB|G|518
7AZS|1|23SB|A|519
7AZS|1|23SB|G|520

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L22B

50S ribosomal protein L22