HL_7AZS_152

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZS_152 not in the Motif Atlas

Geometric match to HL_6CZR_078

Geometric discrepancy: 0.1789

The information below is about HL_6CZR_078

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7AZS|1|23SB|C|570
7AZS|1|23SB|G|571
7AZS|1|23SB|C|572
7AZS|1|23SB|A|573
7AZS|1|23SB|A|574
7AZS|1|23SB|G|575

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L13B

50S ribosomal protein L13

Chain L21B

50S ribosomal protein L21