HL_7AZS_190
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_190 not in the Motif Atlas
- Geometric match to HL_7RQB_056
- Geometric discrepancy: 0.1158
- The information below is about HL_7RQB_056
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_12078.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
7AZS|1|23SB|C|2339
7AZS|1|23SB|G|2340
7AZS|1|23SB|C|2341
7AZS|1|23SB|A|2342
7AZS|1|23SB|A|2343
7AZS|1|23SB|G|2344
7AZS|1|23SB|G|2345
7AZS|1|23SB|G|2346
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L16B
- 50S ribosomal protein L16
- Chain L27B
- 50S ribosomal protein L27
- Chain L5B
- 50S ribosomal protein L5
- Chain PSIB
- Transfer RNA; tRNA
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