HL_7AZS_206
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 7AZS|1|5SB|U|43
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_206 not in the Motif Atlas
- Homologous match to HL_5J7L_203
- Geometric discrepancy: 0.1701
- The information below is about HL_5J7L_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47787.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7AZS|1|5SB|C|40
7AZS|1|5SB|A|41
7AZS|1|5SB|U|42
7AZS|1|5SB|U|43
7AZS|1|5SB|C|44
7AZS|1|5SB|C|45
7AZS|1|5SB|G|46
Current chains
- Chain 5SB
- 5S rRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain L18B
- 50S ribosomal protein L18
- Chain L31B
- 50S ribosomal protein L31
- Chain L5B
- 50S ribosomal protein L5
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