HL_7AZS_209
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 7AZS|1|ASIA|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_209 not in the Motif Atlas
- Homologous match to HL_5J8B_106
- Geometric discrepancy: 0.1762
- The information below is about HL_5J8B_106
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AZS|1|ASIA|G|30
7AZS|1|ASIA|A|31
7AZS|1|ASIA|PSU|32
7AZS|1|ASIA|U|33
7AZS|1|ASIA|G|34
7AZS|1|ASIA|A|35
7AZS|1|ASIA|A|36
7AZS|1|ASIA|MIA|37
7AZS|1|ASIA|A|38
7AZS|1|ASIA|PSU|39
7AZS|1|ASIA|C|40
Current chains
- Chain ASIA
- Phe-tRNA
Nearby chains
- Chain 16SA
- Small subunit ribosomal RNA; SSU rRNA
- Chain 23SA
- Large subunit ribosomal RNA; LSU rRNA
- Chain MRNA
- mRNA
- Chain S12A
- 30S ribosomal protein S12
- Chain S13A
- 30S ribosomal protein S13
Coloring options: