HL_7AZS_224
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 7AZS|1|PSIB|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_224 not in the Motif Atlas
- Geometric match to HL_1WZ2_007
- Geometric discrepancy: 0.1496
- The information below is about HL_1WZ2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.7
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 22
Unit IDs
7AZS|1|PSIB|G|30
7AZS|1|PSIB|A|31
7AZS|1|PSIB|PSU|32
7AZS|1|PSIB|U|33
7AZS|1|PSIB|G|34
7AZS|1|PSIB|A|35
7AZS|1|PSIB|A|36
7AZS|1|PSIB|MIA|37
7AZS|1|PSIB|A|38
7AZS|1|PSIB|PSU|39
7AZS|1|PSIB|C|40
Current chains
- Chain PSIB
- Phe-tRNA
Nearby chains
- Chain 16SB
- Small subunit ribosomal RNA; SSU rRNA
- Chain ESIB
- Transfer RNA; tRNA
- Chain MRNB
- mRNA
- Chain S13B
- 30S ribosomal protein S13
- Chain S9B
- 30S ribosomal protein S9
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