HL_7AZY_031
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- AUGAGAACU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZY_031 not in the Motif Atlas
- Homologous match to HL_8C3A_031
- Geometric discrepancy: 0.1071
- The information below is about HL_8C3A_031
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
7AZY|1|E|A|1462
7AZY|1|E|U|1463
7AZY|1|E|G|1464
7AZY|1|E|A|1465
7AZY|1|E|G|1466
7AZY|1|E|A|1467
7AZY|1|E|A|1468
7AZY|1|E|C|1469
7AZY|1|E|U|1470
Current chains
- Chain E
- 25S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L19-A
- Chain n
- 60S ribosomal protein L31-A
- Chain y
- 60S ribosomal protein L17-A
Coloring options: