HL_7AZY_034

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

GAUUUUAUGC

Length

10 nucleotides

Bulged bases

7AZY|1|E|U|1569

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_034 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.309

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7AZY|1|E|G|1565
7AZY|1|E|A|1566
7AZY|1|E|U|1567
7AZY|1|E|U|1568
7AZY|1|E|U|1569
7AZY|1|E|U|1570
7AZY|1|E|A|1571
7AZY|1|E|U|1572
7AZY|1|E|G|1573
7AZY|1|E|C|1574

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain G

5.8S ribosomal RNA; 5.8S rRNA

Chain I

60S ribosomal protein L25