HL_7AZY_035

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

GUUAAGAUUC

Length

10 nucleotides

Bulged bases

7AZY|1|E|U|1606, 7AZY|1|E|U|1607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_035 not in the Motif Atlas

Homologous match to HL_5TBW_035

Geometric discrepancy: 0.0659

The information below is about HL_5TBW_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35087.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7AZY|1|E|G|1599
7AZY|1|E|U|1600
7AZY|1|E|U|1601
7AZY|1|E|A|1602
7AZY|1|E|A|1603
7AZY|1|E|G|1604
7AZY|1|E|A|1605
7AZY|1|E|U|1606
7AZY|1|E|U|1607
7AZY|1|E|C|1608

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L34-A

Chain H

60S ribosomal protein L19-A

Chain I

60S ribosomal protein L25