HL_7AZY_051

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

7AZY|1|E|A|2372, 7AZY|1|E|A|2373, 7AZY|1|E|C|2374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_051 not in the Motif Atlas

Homologous match to HL_8C3A_051

Geometric discrepancy: 0.0612

The information below is about HL_8C3A_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.8

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7AZY|1|E|G|2369
7AZY|1|E|G|2370
7AZY|1|E|G|2371
7AZY|1|E|A|2372
7AZY|1|E|A|2373
7AZY|1|E|C|2374
7AZY|1|E|G|2375
7AZY|1|E|G|2376
7AZY|1|E|G|2377
7AZY|1|E|C|2378

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain l

60S ribosomal protein L3

Chain r

60S ribosomal protein L32